We use Dr. Wolpert in Manasquan and he is wonderful! Although not necessarily 'natural-minded', he allows us to make our own choices (aka: we told him we were not vaccinating and he never brought it up again!). He is pro-breastfeeding and not an alarmist by any means. We are really happy with him.
I know a couple of families who go to ABC Pediatrics in Brick and who are very happy. I think they are more 'natural-minded' but can't speak from experience.
Hope that helps!